IL_3JCJ_004
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GACCCC*GAACUC
- Length
- 12 nucleotides
- Bulged bases
- 3JCJ|1|0|C|35
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_004 not in the Motif Atlas
- Geometric match to IL_7A0S_105
- Geometric discrepancy: 0.2528
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
3JCJ|1|0|G|33
3JCJ|1|0|A|34
3JCJ|1|0|C|35
3JCJ|1|0|C|36
3JCJ|1|0|C|37
3JCJ|1|0|C|38
*
3JCJ|1|0|G|44
3JCJ|1|0|A|45
3JCJ|1|0|A|46
3JCJ|1|0|C|47
3JCJ|1|0|U|48
3JCJ|1|0|C|49
Current chains
- Chain 0
- 5S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L5
- Chain N
- 50S ribosomal protein L18
Coloring options: