IL_3JCJ_008
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GA*UCC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_008 not in the Motif Atlas
- Homologous match to IL_5J7L_247
- Geometric discrepancy: 0.1727
- The information below is about IL_5J7L_247
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_51454.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 45
Unit IDs
3JCJ|1|A|G|43
3JCJ|1|A|A|44
*
3JCJ|1|A|U|434
3JCJ|1|A|C|435
3JCJ|1|A|C|436
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L34
Coloring options: