IL_3JCJ_210
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAAGUU*AAUGUGCCUUCGGGAAC
- Length
- 23 nucleotides
- Bulged bases
- 3JCJ|1|g|U|1029, 3JCJ|1|g|U|1030, 3JCJ|1|g|C|1031
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_210 not in the Motif Atlas
- Homologous match to IL_5J7L_045
- Geometric discrepancy: 0.3414
- The information below is about IL_5J7L_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_13394.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
- Number of instances in this motif group
- 1
Unit IDs
3JCJ|1|g|G|1003
3JCJ|1|g|A|1004
3JCJ|1|g|A|1005
3JCJ|1|g|G|1006
3JCJ|1|g|U|1007
3JCJ|1|g|U|1008
*
3JCJ|1|g|A|1021
3JCJ|1|g|A|1022
3JCJ|1|g|U|1023
3JCJ|1|g|G|1024
3JCJ|1|g|U|1025
3JCJ|1|g|G|1026
3JCJ|1|g|C|1027
3JCJ|1|g|C|1028
3JCJ|1|g|U|1029
3JCJ|1|g|U|1030
3JCJ|1|g|C|1031
3JCJ|1|g|G|1032
3JCJ|1|g|G|1033
3JCJ|1|g|G|1034
3JCJ|1|g|A|1035
3JCJ|1|g|A|1036
3JCJ|1|g|C|1037
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain w
- 30S ribosomal protein S14
Coloring options: