IL_3JCN_133
3D structure
- PDB id
- 3JCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GGAGG*CGUUAC
- Length
- 11 nucleotides
- Bulged bases
- 3JCN|1|a|U|485
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCN_133 not in the Motif Atlas
- Homologous match to IL_5J7L_022
- Geometric discrepancy: 0.0988
- The information below is about IL_5J7L_022
- Detailed Annotation
- tSH-tHW-tWW
- Broad Annotation
- No text annotation
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
3JCN|1|a|G|446
3JCN|1|a|G|447
3JCN|1|a|A|448
3JCN|1|a|G|449
3JCN|1|a|G|450
*
3JCN|1|a|C|483
3JCN|1|a|G|484
3JCN|1|a|U|485
3JCN|1|a|U|486
3JCN|1|a|A|487
3JCN|1|a|C|488
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S4
- Chain s
- 30S ribosomal protein S16
Coloring options: