IL_3JCN_179
3D structure
- PDB id
- 3JCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UGUUG*CAUCA
- Length
- 10 nucleotides
- Bulged bases
- 3JCN|1|A|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCN_179 not in the Motif Atlas
- Homologous match to IL_5J7L_384
- Geometric discrepancy: 0.4655
- The information below is about IL_5J7L_384
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33835.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
3JCN|1|A|U|1058
3JCN|1|A|G|1059
3JCN|1|A|U|1060
3JCN|1|A|U|1061
3JCN|1|A|G|1062
*
3JCN|1|A|C|1076
3JCN|1|A|A|1077
3JCN|1|A|U|1078
3JCN|1|A|C|1079
3JCN|1|A|A|1080
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain I
- 50S ribosomal protein L11
Coloring options: