IL_3JCS_007
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AU*AGUUGU
- Length
- 8 nucleotides
- Bulged bases
- 3JCS|1|1|U|146
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCS_007 not in the Motif Atlas
- Geometric match to IL_5TBW_007
- Geometric discrepancy: 0.1678
- The information below is about IL_5TBW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19724.3
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
3JCS|1|1|A|122
3JCS|1|1|U|123
*
3JCS|1|1|A|143
3JCS|1|1|G|144
3JCS|1|1|U|145
3JCS|1|1|U|146
3JCS|1|1|G|147
3JCS|1|1|U|148
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain 7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain G
- ribosomal protein L8e
- Chain M
- ribosomal protein L15e
- Chain a
- ribosomal protein L29
Coloring options: