IL_3JCS_029
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CC(OMG)AAAG*CUAGUAGCUG
- Length
- 17 nucleotides
- Bulged bases
- 3JCS|1|1|A|984, 3JCS|1|1|G|988
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|1|C|854
3JCS|1|1|C|855
3JCS|1|1|OMG|856
3JCS|1|1|A|857
3JCS|1|1|A|858
3JCS|1|1|A|859
3JCS|1|1|G|860
*
3JCS|1|1|C|982
3JCS|1|1|U|983
3JCS|1|1|A|984
3JCS|1|1|G|985
3JCS|1|1|U|986
3JCS|1|1|A|987
3JCS|1|1|G|988
3JCS|1|1|C|989
3JCS|1|1|U|990
3JCS|1|1|G|991
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- ribosomal protein L4
- Chain I
- ribosomal protein L13e
- Chain L
- ribosomal protein L15
- Chain M
- ribosomal protein L15e
- Chain j
- ribosomal protein L37e
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