IL_3JCS_039

3D structure

PDB id

3JCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UAGUAGA*UAGAG

Length

12 nucleotides

Bulged bases

3JCS|1|1|G|1160

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCS|1|1|U|1027
3JCS|1|1|A|1028
3JCS|1|1|G|1029
3JCS|1|1|U|1030
3JCS|1|1|A|1031
3JCS|1|1|G|1032
3JCS|1|1|A|1033
*
3JCS|1|1|U|1158
3JCS|1|1|A|1159
3JCS|1|1|G|1160
3JCS|1|1|A|1161
3JCS|1|1|G|1162

Current chains

Chain 1

26S alpha ribosomal RNA

Nearby chains

Chain P

ribosomal protein L18e

Chain S

ribosomal protein L21e

Chain b

ribosomal protein L29e

Chain c

ribosomal protein L30