IL_3JCS_052
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAUACGUGAAAAGG*CCGAAAAUGGAUGACGC
- Length
- 31 nucleotides
- Bulged bases
- 3JCS|1|1|U|1257, 3JCS|1|1|A|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|1|G|1255
3JCS|1|1|A|1256
3JCS|1|1|U|1257
3JCS|1|1|A|1258
3JCS|1|1|C|1259
3JCS|1|1|G|1260
3JCS|1|1|U|1261
3JCS|1|1|G|1262
3JCS|1|1|A|1263
3JCS|1|1|A|1264
3JCS|1|1|A|1265
3JCS|1|1|A|1266
3JCS|1|1|G|1267
3JCS|1|1|G|1268
*
3JCS|1|1|C|1360
3JCS|1|1|C|1361
3JCS|1|1|G|1362
3JCS|1|1|A|1363
3JCS|1|1|A|1364
3JCS|1|1|A|1365
3JCS|1|1|A|1366
3JCS|1|1|U|1367
3JCS|1|1|G|1368
3JCS|1|1|G|1369
3JCS|1|1|A|1370
3JCS|1|1|U|1371
3JCS|1|1|G|1372
3JCS|1|1|A|1373
3JCS|1|1|C|1374
3JCS|1|1|G|1375
3JCS|1|1|C|1376
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain 8
- 5S ribosomal RNA; 5S rRNA
- Chain B
- ribosomal protein L3
- Chain H
- ribosomal protein L13
- Chain N
- ribosomal protein L16
- Chain R
- ribosomal protein L20e
- Chain c
- ribosomal protein L30
- Chain g
- ribosomal protein L33e
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