IL_3JCS_053
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGUGUUGGUGG*CCACCGGCCC
- Length
- 21 nucleotides
- Bulged bases
- 3JCS|1|1|U|1270
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|1|G|1268
3JCS|1|1|G|1269
3JCS|1|1|U|1270
3JCS|1|1|G|1271
3JCS|1|1|U|1272
3JCS|1|1|U|1273
3JCS|1|1|G|1274
3JCS|1|1|G|1275
3JCS|1|1|U|1276
3JCS|1|1|G|1277
3JCS|1|1|G|1278
*
3JCS|1|1|C|1351
3JCS|1|1|C|1352
3JCS|1|1|A|1353
3JCS|1|1|C|1354
3JCS|1|1|C|1355
3JCS|1|1|G|1356
3JCS|1|1|G|1357
3JCS|1|1|C|1358
3JCS|1|1|C|1359
3JCS|1|1|C|1360
Current chains
- Chain 1
- 26S alpha ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain 8
- 5S ribosomal RNA; 5S rRNA
- Chain E
- ribosomal protein L6
- Chain N
- ribosomal protein L16
- Chain R
- ribosomal protein L20e
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