IL_3JCS_066
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AUGUG*CAACU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18835.1
- Basepair signature
- cWW-L-R-tSH-tWH-tHW-L-R-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
3JCS|1|1|A|1776
3JCS|1|1|U|1777
3JCS|1|1|G|1778
3JCS|1|1|U|1779
3JCS|1|1|G|1780
*
3JCS|1|2|C|4
3JCS|1|2|A|5
3JCS|1|2|A|6
3JCS|1|2|C|7
3JCS|1|2|U|8
Current chains
- Chain 1
- 26S alpha ribosomal RNA
- Chain 2
- 26S delta ribosomal RNA
Nearby chains
- Chain 3
- 26S gamma ribosomal RNA
- Chain 7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain h
- ribosomal protein L34e
- Chain k
- ribosomal protein L38e
Coloring options: