IL_3JCS_095
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AUGAAGA*UUGUU
- Length
- 12 nucleotides
- Bulged bases
- 3JCS|1|2|G|771, 3JCS|1|2|U|1013
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_97868.1
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 5
Unit IDs
3JCS|1|2|A|766
3JCS|1|2|U|767
3JCS|1|2|G|768
3JCS|1|2|A|769
3JCS|1|2|A|770
3JCS|1|2|G|771
3JCS|1|2|A|772
*
3JCS|1|2|U|1010
3JCS|1|2|U|1011
3JCS|1|2|G|1012
3JCS|1|2|U|1013
3JCS|1|2|U|1014
Current chains
- Chain 2
- 26S delta ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- ribosomal protein L2
- Chain G
- ribosomal protein L8e
- Chain V
- ribosomal protein L23
Coloring options: