IL_3JCS_113
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AUCUCCGGCUUUGCUGGGGCUUG*CAAGAU
- Length
- 29 nucleotides
- Bulged bases
- 3JCS|1|3|C|78, 3JCS|1|3|C|84, 3JCS|1|3|U|85
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCS|1|3|A|74
3JCS|1|3|U|77
3JCS|1|3|C|78
3JCS|1|3|U|79
3JCS|1|3|C|80
3JCS|1|3|C|81
3JCS|1|3|G|82
3JCS|1|3|G|83
3JCS|1|3|C|84
3JCS|1|3|U|85
3JCS|1|3|U|86
3JCS|1|3|U|87
3JCS|1|3|G|88
3JCS|1|3|C|89
3JCS|1|3|U|90
3JCS|1|3|G|91
3JCS|1|3|G|92
3JCS|1|3|G|93
3JCS|1|3|G|94
3JCS|1|3|C|95
3JCS|1|3|U|96
3JCS|1|3|U|97
3JCS|1|3|G|98
*
3JCS|1|3|C|136
3JCS|1|3|A|137
3JCS|1|3|A|138
3JCS|1|3|G|139
3JCS|1|3|A|140
3JCS|1|3|U|141
Current chains
- Chain 3
- 26S gamma ribosomal RNA
Nearby chains
- Chain h
- ribosomal protein L34e
- Chain k
- ribosomal protein L38e
Coloring options: