IL_3JCS_134

3D structure

PDB id

3JCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAGGA*UUCUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCS|1|1|G|712
3JCS|1|1|A|713
3JCS|1|1|G|714
3JCS|1|1|G|715
3JCS|1|1|A|716
*
3JCS|1|1|U|734
3JCS|1|1|U|735
3JCS|1|1|C|736
3JCS|1|1|U|737
3JCS|1|1|C|738

Current chains

Chain 1

26S alpha ribosomal RNA

Nearby chains

Chain C

ribosomal protein L4

Chain I

ribosomal protein L13e

Chain L

ribosomal protein L15

Chain M

ribosomal protein L15e