IL_3JCT_033
3D structure
- PDB id
- 3JCT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-em structure of eukaryotic pre-60S ribosomal subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- UUUCC*GGAUA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCT_033 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3654
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
3JCT|1|1|U|954
3JCT|1|1|U|955
3JCT|1|1|U|956
3JCT|1|1|C|957
3JCT|1|1|C|958
*
3JCT|1|1|G|963
3JCT|1|1|G|964
3JCT|1|1|A|965
3JCT|1|1|U|966
3JCT|1|1|A|967
Current chains
- Chain 1
- RDN25-1 rRNA
Nearby chains
- Chain T
- 60S ribosomal protein L21-A
- Chain m
- Nucleolar GTP-binding protein 2
Coloring options: