IL_3JCT_125
3D structure
- PDB id
- 3JCT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-em structure of eukaryotic pre-60S ribosomal subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- UGAUAC*GUUAA
- Length
- 11 nucleotides
- Bulged bases
- 3JCT|1|6|A|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_39984.1
- Basepair signature
- cWW-L-R-R-R-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
3JCT|1|6|U|30
3JCT|1|6|G|31
3JCT|1|6|A|32
3JCT|1|6|U|33
3JCT|1|6|A|34
3JCT|1|6|C|35
*
3JCT|1|6|G|44
3JCT|1|6|U|45
3JCT|1|6|U|46
3JCT|1|6|A|47
3JCT|1|6|A|48
Current chains
- Chain 6
- ITS2-1 miscRNA
Nearby chains
- Chain K
- Proteasome-interacting protein CIC1
- Chain o
- Ribosome biogenesis protein 15
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