IL_3K0J_008
3D structure
- PDB id
- 3K0J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization module
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUG*CUGAGAAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 3K0J|1|F|U|146
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3K0J|1|F|G|113
3K0J|1|F|G|114
3K0J|1|F|U|115
3K0J|1|F|G|116
*
3K0J|1|F|C|138
3K0J|1|F|U|139
3K0J|1|F|G|140
3K0J|1|F|A|141
3K0J|1|F|G|142
3K0J|1|F|A|143
3K0J|1|F|A|144
3K0J|1|F|A|145
3K0J|1|F|U|146
3K0J|1|F|A|147
3K0J|1|F|C|148
Current chains
- Chain F
- RNA (87-MER)
Nearby chains
- Chain B
- U1 small nuclear ribonucleoprotein A
Coloring options: