3D structure

PDB id
3KTW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the SRP19/S-domain SRP RNA complex of Sulfolobus solfataricus
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GG*UUC
Length
5 nucleotides
Bulged bases
3KTW|1|C|U|179
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_89505.2
Basepair signature
cWW-L-cWW
Number of instances in this motif group
94

Unit IDs

3KTW|1|C|G|152
3KTW|1|C|G|153
*
3KTW|1|C|U|178
3KTW|1|C|U|179
3KTW|1|C|C|180

Current chains

Chain C
SRP RNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0797 s