3KTW Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3KTW_001 | 1/C/163:168 | GNRA HL_37824.6 | ||
| HL_3KTW_002 | 1/C/209:214 | GNRA HL_37824.6 | ||
| HL_3KTW_003 | 1/D/163:168 | GNRA | homologous HL_3KTW_001 HL_37824.6 | |
| HL_3KTW_004 | 1/D/209:214 | GNRA | homologous HL_3KTW_002 HL_37824.6 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3KTW_010 | 1/C/152:153, 1/C/178:180 | Single bulged U IL_89505.3 | ||
| IL_3KTW_003 | 1/C/193:199, 1/C/224:227 | No text annotation IL_91636.1 | ||
| IL_3KTW_004 | 1/C/201:207, 1/C/216:222 | tSH-tHW-tHS with extra cWW pairs IL_65851.3 | ||
| IL_3KTW_009 | 1/D/152:153, 1/D/178:180 | Single bulged U | homologous IL_3KTW_010 IL_89505.3 | |
| IL_3KTW_006 | 1/D/193:199, 1/D/224:227 | No text annotation | homologous IL_3KTW_003 IL_91636.1 | |
| IL_3KTW_007 | 1/D/201:207, 1/D/216:222 | tSH-tHW-tHS with extra cWW pairs | homologous IL_3KTW_004 IL_65851.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3KTW_001 | No text annotation | ||
| IL_3KTW_008 | No text annotation | ||
| IL_3KTW_002 | Isolated non-canonical cWW with bulges | ||
| IL_3KTW_005 | Isolated non-canonical cWW with bulges |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3KTW_001 | 1/C/144:148, 1/C/184:189, 1/C/231:234 | No text annotation J3_93637.1 | ||
| J3_3KTW_002 | 1/C/144:148, 1/C/184:190, 1/C/230:234 | No text annotation J3_23373.1 | ||
| J3_3KTW_004 | 1/D/145:148, 1/D/184:191, 1/D/229:233 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_3KTW_003 | No text annotation |
Coloring options: