3KTW Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3KTW_001 | 1/C/163:168 | GNRA | ||
| HL_3KTW_002 | 1/C/209:214 | GNRA | ||
| HL_3KTW_003 | 1/D/163:168 | GNRA | homologous HL_3KTW_001 NA | |
| HL_3KTW_004 | 1/D/209:214 | GNRA | homologous HL_3KTW_002 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3KTW_010 | 1/C/152:153, 1/C/178:180 | Single bulged U | ||
| IL_3KTW_003 | 1/C/193:199, 1/C/224:227 | No text annotation | ||
| IL_3KTW_004 | 1/C/201:207, 1/C/216:222 | tSH-tHW-tHS with extra cWW pairs | ||
| IL_3KTW_009 | 1/D/152:153, 1/D/178:180 | Single bulged U | homologous IL_3KTW_010 NA | |
| IL_3KTW_006 | 1/D/193:199, 1/D/224:227 | No text annotation | homologous IL_3KTW_003 NA | |
| IL_3KTW_007 | 1/D/201:207, 1/D/216:222 | tSH-tHW-tHS with extra cWW pairs | homologous IL_3KTW_004 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3KTW_001 | Tandem non-canonical cWW pairs | ||
| IL_3KTW_008 | No text annotation | ||
| IL_3KTW_002 | Isolated non-canonical cWW with bulges | ||
| IL_3KTW_005 | Isolated non-canonical cWW with bulges |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3KTW_001 | 1/C/144:148, 1/C/184:189, 1/C/231:234 | No text annotation | ||
| J3_3KTW_002 | 1/C/144:148, 1/C/184:190, 1/C/230:234 | No text annotation | ||
| J3_3KTW_004 | 1/D/145:148, 1/D/184:191, 1/D/229:233 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_3KTW_003 | No text annotation |
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