IL_3NDB_004

3D structure

PDB id

3NDB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a signal sequence bound to the signal recognition particle

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GG*CGC

Length

5 nucleotides

Bulged bases

3NDB|1|M|G|240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.11

Basepair signature

cWW-L-cWW

Number of instances in this motif group

46

Unit IDs

3NDB|1|M|G|137
3NDB|1|M|G|138
*
3NDB|1|M|C|239
3NDB|1|M|G|240
3NDB|1|M|C|241

Current chains

Chain M

SRP RNA

Nearby chains