3NDB Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3NDB_001 | 1/M/162:167 | No text annotation HL_57875.1 | ||
| HL_3NDB_002 | 1/M/208:213 | GNRA HL_37824.7 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3NDB_002 | 1/M/128:131, 1/M/247:253 | No text annotation IL_22829.2 | ||
| IL_3NDB_004 | 1/M/137:138, 1/M/239:241 | Single bulged G IL_00225.13 | ||
| IL_3NDB_005 | 1/M/139:141, 1/M/237:238 | Single bulged U IL_89505.4 | ||
| IL_3NDB_006 | 1/M/152:154, 1/M/175:178 | No text annotation IL_31531.3 | ||
| IL_3NDB_007 | 1/M/192:198, 1/M/223:226 | tSH-tHW IL_44874.1 | ||
| IL_3NDB_008 | 1/M/200:206, 1/M/215:221 | No text annotation IL_65851.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3NDB_001 | Self complementary | ||
| IL_3NDB_009 | No text annotation | ||
| IL_3NDB_003 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3NDB_001 | 1/M/145:148, 1/M/182:187, 1/M/231:233 | No text annotation J3_72575.1 |
Problematic loops
No problematic loops
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