IL_3O58_002
3D structure
- PDB id
- 3O58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- AAUCA*UGUU
- Length
- 9 nucleotides
- Bulged bases
- 3O58|1|1|U|14, 3O58|1|1|C|15
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74605.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 3
Unit IDs
3O58|1|1|A|12
3O58|1|1|A|13
3O58|1|1|U|14
3O58|1|1|C|15
3O58|1|1|A|16
*
3O58|1|3|U|143
3O58|1|3|G|144
3O58|1|3|U|145
3O58|1|3|U|146
Current chains
- Chain 1
- 25S ribosomal RNA
- Chain 3
- 5.8S ribosomal RNA
Nearby chains
- Chain O
- 60S ribosomal protein L15-A
- Chain W
- 60S ribosomal protein L25
Coloring options: