IL_3O58_047

3D structure

PDB id

3O58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

GGG*UAAUC

Length

8 nucleotides

Bulged bases

3O58|1|1|G|908, 3O58|1|1|A|920, 3O58|1|1|A|921, 3O58|1|1|U|922

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14611.1

Basepair signature

Not available

Number of instances in this motif group

5

Unit IDs

3O58|1|1|G|907
3O58|1|1|G|908
3O58|1|1|G|909
*
3O58|1|1|U|919
3O58|1|1|A|920
3O58|1|1|A|921
3O58|1|1|U|922
3O58|1|1|C|923

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L2

Chain O

60S ribosomal protein L15-A

Chain Q

60S ribosomal protein L17-A

Chain d

60S ribosomal protein L37-A