Motif IL_14611.1 Version IL_14611.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3O58_047 | 3O58 | 0.0000 | 4 | 1 | G | 907 | G | 909 | * | U | 919 | C | 923 | cWW | cWW | |
| 2 | IL_3PYO_022 | 3PYO | 0.2442 | 4 | A | G | 775 | A | 777 | * | U | 787 | C | 791 | cWW | cWW | |
| 3 | IL_2ZJR_020 | 2ZJR | 0.3159 | 4 | Multiple bulged bases (H) | X | G | 788 | A | 790 | * | U | 800 | C | 804 | cWW | cWW |
| 4 | IL_1S72_031 | 1S72 | 0.3363 | 4 | Multiple bulged bases (H) | 0 | G | 868 | G | 870 | * | C | 880 | C | 884 | cWW | cWW |
| 5 | IL_2QBG_026 | 2QBG | 0.3028 | 4 | B | G | 775 | G | 777 | * | C | 787 | C | 791 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGA*UAACC | 2 |
| GGG*UAAUC | 1 |
| GGG*CCAUC | 1 |
| GGG*CAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*AAU | 2 |
| G*AAC | 2 |
| G*CAU | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_14611.1 | Only in the parent motif |
|---|---|---|---|
| IL_11419.1 Compare | IL_2ZJR_020, IL_1S72_031 | IL_2QBG_026, IL_3PYO_022, IL_3O58_047 | IL_3F1H_022 |
Children motifs
| Child motif | Common motif instances | Only in IL_14611.1 | Only in the child motif |
|---|---|---|---|
| IL_13069.1 Compare | IL_2QBG_026, IL_1S72_031, IL_2ZJR_020 | IL_3PYO_022, IL_3O58_047 | IL_4A1B_040, IL_3U5H_035, IL_3UXR_023 |
- Annotations
-
- (3)
- Multiple bulged bases (H) (2)
- Basepair signature
- Heat map statistics
- Min 0.08 | Avg 0.15 | Max 0.34
Coloring options: