IL_3O58_123

3D structure

PDB id

3O58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome. This entry consists of the 60S subunit of the first 80S in the asymmetric unit.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

UUGA*UACA

Length

8 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91286.1

Basepair signature

Not available

Number of instances in this motif group

39

Unit IDs

3O58|1|1|U|2718
3O58|1|1|U|2719
3O58|1|1|G|2720
3O58|1|1|A|2721
*
3O58|1|1|U|2735
3O58|1|1|A|2736
3O58|1|1|C|2737
3O58|1|1|A|2738

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L5

Chain R

60S ribosomal protein L18

Chain T

60S ribosomal protein L21-A

Chain f

60S ribosomal protein L42

Chain p

Unassigned secondary structure