IL_3OK7_003

3D structure

PDB id

3OK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a bacterial RNase P holoenzyme in complex with tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GACAG*CC

Length

7 nucleotides

Bulged bases

3OK7|1|B|A|104, 3OK7|1|B|C|105

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OK7_003 not in the Motif Atlas

Geometric match to IL_5TBW_374

Geometric discrepancy: 0.3525

The information below is about IL_5TBW_374

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.2

Basepair signature

cWW-cWW-cWW-R

Number of instances in this motif group

8

Unit IDs

3OK7|1|B|G|103
3OK7|1|B|A|104
3OK7|1|B|C|105
3OK7|1|B|A|106
3OK7|1|B|G|107
*
3OK7|1|B|C|209
3OK7|1|B|C|210

Current chains

Chain B

RNase P RNA

Nearby chains

Chain C

Transfer RNA; tRNA