IL_3OW2_001

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUGGAUU*AUGAAAU

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_001 not in the Motif Atlas

Homologous match to IL_4V9F_001

Geometric discrepancy: 0.0456

The information below is about IL_4V9F_001

Detailed Annotation

Triple sheared with non-canonical cWW

Broad Annotation

Triple sheared

Motif group

IL_04021.2

Basepair signature

cWW-L-R-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

3OW2|1|0|G|21
3OW2|1|0|U|22
3OW2|1|0|G|23
3OW2|1|0|G|24
3OW2|1|0|A|25
3OW2|1|0|U|26
3OW2|1|0|U|27
*
3OW2|1|0|A|516
3OW2|1|0|U|517
3OW2|1|0|G|518
3OW2|1|0|A|519
3OW2|1|0|A|520
3OW2|1|0|A|521
3OW2|1|0|U|522

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P

Chain Q

50S ribosomal protein L22P

Chain X

50S ribosomal protein L32e