IL_3OW2_012

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAGC*GACG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_012 not in the Motif Atlas

Geometric match to IL_6JDV_002

Geometric discrepancy: 0.2202

The information below is about IL_6JDV_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

3OW2|1|0|C|287
3OW2|1|0|A|288
3OW2|1|0|G|289
3OW2|1|0|C|290
*
3OW2|1|0|G|362
3OW2|1|0|A|363
3OW2|1|0|C|364
3OW2|1|0|G|365

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain L

50S ribosomal protein L15e