IL_3OW2_013

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CCGACCG*CCAGUACG

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_013 not in the Motif Atlas

Homologous match to IL_4V9F_012

Geometric discrepancy: 0.0655

The information below is about IL_4V9F_012

Detailed Annotation

8x7 Sarcin-Ricin with CC bifurcated pair; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_59724.1

Basepair signature

cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW

Number of instances in this motif group

1

Unit IDs

3OW2|1|0|C|290
3OW2|1|0|C|291
3OW2|1|0|G|292
3OW2|1|0|A|293
3OW2|1|0|C|294
3OW2|1|0|C|295
3OW2|1|0|G|296
*
3OW2|1|0|C|355
3OW2|1|0|C|356
3OW2|1|0|A|357
3OW2|1|0|G|358
3OW2|1|0|U|359
3OW2|1|0|A|360
3OW2|1|0|C|361
3OW2|1|0|G|362

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains