IL_3OW2_019

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

ACGAAU*AGACU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_019 not in the Motif Atlas

Homologous match to IL_4V9F_018

Geometric discrepancy: 0.0763

The information below is about IL_4V9F_018

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_97631.1

Basepair signature

cWW-L-R-L-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

3OW2|1|0|A|562
3OW2|1|0|C|563
3OW2|1|0|G|564
3OW2|1|0|A|565
3OW2|1|0|A|566
3OW2|1|0|U|567
*
3OW2|1|0|A|591
3OW2|1|0|G|592
3OW2|1|0|A|593
3OW2|1|0|C|594
3OW2|1|0|U|595

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain V

50S ribosomal protein L30P

Chain X

50S ribosomal protein L32e