IL_3OW2_043

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CCUAGACAG*CCGAG

Length

14 nucleotides

Bulged bases

3OW2|1|0|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_043 not in the Motif Atlas

Homologous match to IL_4V9F_042

Geometric discrepancy: 0.0473

The information below is about IL_4V9F_042

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_99692.2

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

3OW2|1|0|C|1147
3OW2|1|0|C|1148
3OW2|1|0|U|1149
3OW2|1|0|A|1150
3OW2|1|0|G|1151
3OW2|1|0|A|1152
3OW2|1|0|C|1153
3OW2|1|0|A|1154
3OW2|1|0|G|1155
*
3OW2|1|0|C|1212
3OW2|1|0|C|1213
3OW2|1|0|G|1214
3OW2|1|0|A|1215
3OW2|1|0|G|1216

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain G

50S ribosomal protein L10E