3D structure

PDB id
3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
CCUAGACAG*CCGAG
Length
14 nucleotides
Bulged bases
3OW2|1|0|A|1150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_3OW2_043 not in the Motif Atlas
Homologous match to IL_4V9F_042
Geometric discrepancy: 0.0473
The information below is about IL_4V9F_042
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_99692.2
Basepair signature
cWW-tSS-tSH-L-R-R-L-cWW-L-L
Number of instances in this motif group
6

Unit IDs

3OW2|1|0|C|1147
3OW2|1|0|C|1148
3OW2|1|0|U|1149
3OW2|1|0|A|1150
3OW2|1|0|G|1151
3OW2|1|0|A|1152
3OW2|1|0|C|1153
3OW2|1|0|A|1154
3OW2|1|0|G|1155
*
3OW2|1|0|C|1212
3OW2|1|0|C|1213
3OW2|1|0|G|1214
3OW2|1|0|A|1215
3OW2|1|0|G|1216

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain G
50S ribosomal protein L10E

Coloring options:


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