IL_3OW2_066

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGCAAAU*ACUCGUACG

Length

16 nucleotides

Bulged bases

3OW2|1|0|A|1857, 3OW2|1|0|C|1872, 3OW2|1|0|C|1876

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_066 not in the Motif Atlas

Homologous match to IL_4V9F_065

Geometric discrepancy: 0.0464

The information below is about IL_4V9F_065

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_17069.5

Basepair signature

cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW

Number of instances in this motif group

5

Unit IDs

3OW2|1|0|C|1854
3OW2|1|0|G|1855
3OW2|1|0|C|1856
3OW2|1|0|A|1857
3OW2|1|0|A|1858
3OW2|1|0|A|1859
3OW2|1|0|U|1860
*
3OW2|1|0|A|1869
3OW2|1|0|C|1870
3OW2|1|0|U|1871
3OW2|1|0|C|1872
3OW2|1|0|G|1873
3OW2|1|0|U|1874
3OW2|1|0|A|1875
3OW2|1|0|C|1876
3OW2|1|0|G|1877

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain A

50S ribosomal protein L2P

Chain Y

50S ribosomal protein L37Ae