IL_3OW2_072

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGUAGUACCUUG*CUUG

Length

16 nucleotides

Bulged bases

3OW2|1|0|G|1979, 3OW2|1|0|U|1985, 3OW2|1|0|U|2004

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3OW2_072 not in the Motif Atlas

Homologous match to IL_4V9F_071

Geometric discrepancy: 0.0616

The information below is about IL_4V9F_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

3OW2|1|0|C|1975
3OW2|1|0|G|1976
3OW2|1|0|U|1977
3OW2|1|0|A|1978
3OW2|1|0|G|1979
3OW2|1|0|U|1980
3OW2|1|0|A|1981
3OW2|1|0|C|1982
3OW2|1|0|C|1983
3OW2|1|0|U|1984
3OW2|1|0|U|1985
3OW2|1|0|G|1986
*
3OW2|1|0|C|2002
3OW2|1|0|U|2003
3OW2|1|0|U|2004
3OW2|1|0|G|2005

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains