IL_3OXB_010
3D structure
- PDB id
- 3OXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of glycine riboswitch with single mutation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GCAAG*UGAAAC
- Length
- 11 nucleotides
- Bulged bases
- 3OXB|1|B|A|65
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3OXB_010 not in the Motif Atlas
- Geometric match to IL_3OXE_004
- Geometric discrepancy: 0.088
- The information below is about IL_3OXE_004
- Detailed Annotation
- UAA/GAN with extra stack
- Broad Annotation
- UAA/GAN with extra stack
- Motif group
- IL_82787.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
3OXB|1|B|G|38
3OXB|1|B|C|39
3OXB|1|B|A|40
3OXB|1|B|A|41
3OXB|1|B|G|42
*
3OXB|1|B|U|61
3OXB|1|B|G|62
3OXB|1|B|A|63
3OXB|1|B|A|64
3OXB|1|B|A|65
3OXB|1|B|C|66
Current chains
- Chain B
- Domain II of glycine riboswitch
Nearby chains
- Chain A
- Domain II of glycine riboswitch
Coloring options: