IL_3PDR_003
3D structure
- PDB id
- 3PDR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of manganese bound M-box RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.85 Å
Loop
- Sequence
- UGAG*UAAAG
- Length
- 9 nucleotides
- Bulged bases
- 3PDR|1|X|A|155
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_10484.1
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
3PDR|1|X|U|28
3PDR|1|X|G|29
3PDR|1|X|A|30
3PDR|1|X|G|31
*
3PDR|1|X|U|153
3PDR|1|X|A|154
3PDR|1|X|A|155
3PDR|1|X|A|156
3PDR|1|X|G|157
Current chains
- Chain X
- M-box Riboswitch RNA
Nearby chains
- Chain A
- M-box riboswitch (ykoK leader)
Coloring options: