IL_3PIP_149
3D structure
- PDB id
- 3PIP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- UCUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 3PIP|1|X|U|2668, 3PIP|1|X|C|2669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3PIP_149 not in the Motif Atlas
- Homologous match to IL_9DFE_104
- Geometric discrepancy: 0.1918
- The information below is about IL_9DFE_104
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
3PIP|1|X|U|2666
3PIP|1|X|C|2667
3PIP|1|X|U|2668
3PIP|1|X|C|2669
3PIP|1|X|C|2670
*
3PIP|1|X|G|2698
3PIP|1|X|G|2699
3PIP|1|X|U|2700
3PIP|1|X|A|2701
3PIP|1|X|G|2702
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L17
- Chain M
- 50S ribosomal protein L19
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