IL_3PLA_002
3D structure
- PDB id
- 3PLA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a catalytically active substrate-bound box C/D RNP from Sulfolobus solfataricus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- UUGUGAUG*CUGAA
- Length
- 13 nucleotides
- Bulged bases
- 3PLA|1|N|U|11
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3PLA_002 not in the Motif Atlas
- Geometric match to IL_3NVI_002
- Geometric discrepancy: 0.0785
- The information below is about IL_3NVI_002
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_69229.3
- Basepair signature
- cWW-L-tSH-L-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
3PLA|1|N|U|8
3PLA|1|N|U|9
3PLA|1|N|G|10
3PLA|1|N|U|11
3PLA|1|N|G|12
3PLA|1|N|A|13
3PLA|1|N|U|14
3PLA|1|N|G|15
*
3PLA|1|N|C|29||||7_645
3PLA|1|N|U|30||||7_645
3PLA|1|N|G|31||||7_645
3PLA|1|N|A|32||||7_645
3PLA|1|N|A|33||||7_645
Current chains
- Chain N
- C/D guide RNA
Nearby chains
- Chain K
- Pre mRNA splicing protein
- Chain L
- 50S ribosomal protein L7Ae
Coloring options: