IL_3PYO_102
3D structure
- PDB id
- 3PYO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome. This file contains the 50S subunit of the first 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAUGGUAC*GGAGAGUAG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96804.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 5
Unit IDs
3PYO|1|B|C|71
3PYO|1|B|G|72
3PYO|1|B|A|73
3PYO|1|B|U|74
3PYO|1|B|G|75
3PYO|1|B|G|76
3PYO|1|B|U|77
3PYO|1|B|A|78
3PYO|1|B|C|79
*
3PYO|1|B|G|97
3PYO|1|B|G|98
3PYO|1|B|A|99
3PYO|1|B|G|100
3PYO|1|B|A|101
3PYO|1|B|G|102
3PYO|1|B|U|103
3PYO|1|B|A|104
3PYO|1|B|G|105
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L25
- Chain Z
- 50S ribosomal protein L30
Coloring options: