IL_3Q1R_003

3D structure

PDB id

3Q1R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a bacterial RNase P holoenzyme in complex with TRNA and in the presence of 5' leader

Experimental method

X-RAY DIFFRACTION

Resolution

4.21 Å

Loop

Sequence

GACAG*CC

Length

7 nucleotides

Bulged bases

3Q1R|1|B|A|104, 3Q1R|1|B|C|105

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3Q1R_003 not in the Motif Atlas

Geometric match to IL_5TBW_374

Geometric discrepancy: 0.3609

The information below is about IL_5TBW_374

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.2

Basepair signature

cWW-cWW-cWW-R

Number of instances in this motif group

8

Unit IDs

3Q1R|1|B|G|103
3Q1R|1|B|A|104
3Q1R|1|B|C|105
3Q1R|1|B|A|106
3Q1R|1|B|G|107
*
3Q1R|1|B|C|209
3Q1R|1|B|C|210

Current chains

Chain B

RNase P RNA

Nearby chains

Chain C

Transfer RNA; tRNA