IL_3R8O_084

3D structure

PDB id

3R8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3R8O_084 not in the Motif Atlas

Geometric match to IL_5J7L_015

Geometric discrepancy: 0.158

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

3R8O|1|A|U|249
3R8O|1|A|A|250
3R8O|1|A|G|251
3R8O|1|A|U|252
*
3R8O|1|A|A|274
3R8O|1|A|G|275

Current chains

Chain A

16S rRNA

Nearby chains

Chain Q

30S ribosomal protein S17