Motif IL_47074.2 Version IL_47074.2 of this group appears in releases 3.96 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_015 | 5J7L | 0.2147 | 0 | AA | SSU rRNA | U | 249 | A | 250 | G | 251 | U | 252 | * | A | 274 | G | 275 | cWW | cWW |
| 2 | IL_4LFB_012 | 4LFB | 0.0000 | 0 | A | SSU rRNA | U | 249 | A | 250 | G | 251 | U | 252 | * | A | 274 | G | 275 | cWW | cWW |
| 3 | IL_4V9F_016 | 4V9F | 0.2654 | 0 | 0 | LSU rRNA | A | 602 | A | 603 | G | 604 | C | 605 | * | G | 554 | U | 555 | cWW | cWW |
| 4 | IL_8P9A_392 | 8P9A | 0.3636 | 2 | sR | SSU rRNA | U | 318 | U | 319 | G | 322 | A | 323 | * | U | 345 | G | 346 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGU*AG | 2 |
| AAGC*GU | 1 |
| UUUCGA*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AG* | 3 |
| UUCG* | 1 |
Release history
| Release | 3.96 |
|---|---|
| Date | 2025-04-23 |
| Status | Updated, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-cWW-L
- Heat map statistics
- Min 0.21 | Avg 0.28 | Max 0.63
Coloring options: