IL_3R8O_092

3D structure

PDB id

3R8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3R8O_092 not in the Motif Atlas

Geometric match to IL_5J7L_023

Geometric discrepancy: 0.1384

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

3R8O|1|A|G|450
3R8O|1|A|A|451
3R8O|1|A|A|452
3R8O|1|A|G|453
3R8O|1|A|G|454
3R8O|1|A|G|455
*
3R8O|1|A|C|477
3R8O|1|A|A|478
3R8O|1|A|U|479
3R8O|1|A|U|480
3R8O|1|A|G|481
3R8O|1|A|A|482
3R8O|1|A|C|483

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16