IL_3R8O_105

3D structure

PDB id

3R8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3R8O_105 not in the Motif Atlas

Geometric match to IL_5J7L_036

Geometric discrepancy: 0.0807

The information below is about IL_5J7L_036

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

3R8O|1|A|G|774
3R8O|1|A|G|775
3R8O|1|A|G|776
3R8O|1|A|A|777
3R8O|1|A|G|778
*
3R8O|1|A|U|804
3R8O|1|A|C|805

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11