IL_3T1H_032
3D structure
- PDB id
- 3T1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.11 Å
Loop
- Sequence
- GAGUAG*CGCAGAUAC
- Length
- 15 nucleotides
- Bulged bases
- 3T1H|1|A|A|685
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3T1H_032 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.0882
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
3T1H|1|A|G|666
3T1H|1|A|A|667
3T1H|1|A|G|668
3T1H|1|A|U|669
3T1H|1|A|A|670
3T1H|1|A|G|671
*
3T1H|1|A|C|682
3T1H|1|A|G|683
3T1H|1|A|C|684
3T1H|1|A|A|685
3T1H|1|A|G|686
3T1H|1|A|A|687
3T1H|1|A|U|688
3T1H|1|A|A|689
3T1H|1|A|C|690
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain K
- 30S ribosomal protein S11
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