IL_3U5F_081

3D structure

PDB id

3U5F (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 40S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_19986.2

Basepair signature

cWW-cWW-cSW-cWW-cSH-cWW

Number of instances in this motif group

15

Unit IDs

3U5F|1|6|G|1638
3U5F|1|6|C|1639
3U5F|1|6|C|1640
3U5F|1|6|C|1641
*
3U5F|1|6|G|1760
3U5F|1|6|U|1761
3U5F|1|6|A|1762
3U5F|1|6|A|1763
3U5F|1|6|C|1764

Current chains

Chain 6

18S rRNA

Nearby chains