IL_3U5H_020

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAUAAAUC*GGAAUAC

Length

16 nucleotides

Bulged bases

3U5H|1|5|A|519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37347.1

Basepair signature

cWW-cHW-L-tHW-tHW-tHW-bif-cWW

Number of instances in this motif group

1

Unit IDs

3U5H|1|5|G|517
3U5H|1|5|G|518
3U5H|1|5|A|519
3U5H|1|5|U|520
3U5H|1|5|A|521
3U5H|1|5|A|522
3U5H|1|5|A|523
3U5H|1|5|U|524
3U5H|1|5|C|525
*
3U5H|1|5|G|567
3U5H|1|5|G|568
3U5H|1|5|A|569
3U5H|1|5|A|570
3U5H|1|5|U|571
3U5H|1|5|A|572
3U5H|1|5|C|573

Current chains

Chain 5

25S rRNA

Nearby chains