IL_3U5H_056

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUCAUCAG*CUCAAG

Length

14 nucleotides

Bulged bases

3U5H|1|5|U|1191, 3U5H|1|5|C|1192, 3U5H|1|5|C|1316, 3U5H|1|5|A|1318

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_40053.2

Basepair signature

cWW-tWW-L-tWW-tWH-cWW

Number of instances in this motif group

4

Unit IDs

3U5H|1|5|C|1187
3U5H|1|5|U|1188
3U5H|1|5|C|1189
3U5H|1|5|A|1190
3U5H|1|5|U|1191
3U5H|1|5|C|1192
3U5H|1|5|A|1193
3U5H|1|5|G|1194
*
3U5H|1|5|C|1314
3U5H|1|5|U|1315
3U5H|1|5|C|1316
3U5H|1|5|A|1317
3U5H|1|5|A|1318
3U5H|1|5|G|1319

Current chains

Chain 5

25S rRNA

Nearby chains