IL_3U5H_095

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

3U5H|1|5|A|2281, 3U5H|1|5|C|2287, 3U5H|1|5|C|2306

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_98655.1

Basepair signature

cWW-L-cHW-L-L-tHH-tSW-L-cWW

Number of instances in this motif group

1

Unit IDs

3U5H|1|5|C|2277
3U5H|1|5|C|2278
3U5H|1|5|A|2279
3U5H|1|5|A|2280
3U5H|1|5|A|2281
3U5H|1|5|U|2282
3U5H|1|5|G|2283
3U5H|1|5|C|2284
3U5H|1|5|C|2285
3U5H|1|5|U|2286
3U5H|1|5|C|2287
3U5H|1|5|G|2288
*
3U5H|1|5|C|2304
3U5H|1|5|G|2305
3U5H|1|5|C|2306
3U5H|1|5|G|2307

Current chains

Chain 5

25S rRNA

Nearby chains