IL_3UXR_039

3D structure

PDB id

3UXR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus. This file contains the 50S subunit of one 70S ribosome. The entire crystal structure contains two 70S ribosomes.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUAAGUG*CUUAAG

Length

13 nucleotides

Bulged bases

3UXR|1|A|U|1142, 3UXR|1|A|A|1143

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38807.1

Basepair signature

11_cWW-tWH--tHW-cSH--cWW

Number of instances in this motif group

4

Unit IDs

3UXR|1|A|C|1018
3UXR|1|A|U|1019
3UXR|1|A|A|1020
3UXR|1|A|A|1021
3UXR|1|A|G|1022
3UXR|1|A|U|1023
3UXR|1|A|G|1024
*
3UXR|1|A|C|1140
3UXR|1|A|U|1141
3UXR|1|A|U|1142
3UXR|1|A|A|1142|||A
3UXR|1|A|A|1143
3UXR|1|A|G|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L6

Chain N

50S ribosomal protein L13