IL_3V2F_014
3D structure
- PDB id
- 3V2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of YfiA bound to the 70S ribosome. This PDB entry contains coordinates for the 50S subunit of the 2nd ribosome in the ASU
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 3V2F|1|A|U|504, 3V2F|1|A|G|508
- QA status
- QA data not found
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02359.3
- Basepair signature
- cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
3V2F|1|A|G|481
3V2F|1|A|A|482
3V2F|1|A|A|483
3V2F|1|A|C|484
*
3V2F|1|A|G|496
3V2F|1|A|A|497
3V2F|1|A|G|498
3V2F|1|A|U|499
3V2F|1|A|G|500
3V2F|1|A|A|501
3V2F|1|A|A|502
3V2F|1|A|A|503
3V2F|1|A|U|504
3V2F|1|A|A|505
3V2F|1|A|G|506
3V2F|1|A|A|507
3V2F|1|A|G|508
3V2F|1|A|C|509
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain W
- 50S Ribosomal Protein L22
- Chain Y
- 50S Ribosomal Protein L24
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